An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

NONCODE is an integrated knowledge database dedicated to non-coding RNAs (excluding tRNAs and rRNAs). Now, there are 16 species in NONCODE2016(human, mouse, cow, rat, chicken, fruitfly, zebrafish, celegans, yeast...).   More

Jump to section for this gene/transcript

  • Aliases

  • Location

  • Sequence

  • Expression

  • Orthologs

  • Function

  • Disease relation

  • Literature

Using NONCODE databases


Choose species and type, then browse all the entries.

Search a gene/transcipt

Search an exntry or a subset of the database.


Get the basic statistics of the NONCODE database.


Find regions of similarity between your sequences.


Find a transcript location in genome.

ID Conversion

Convert NONCODE ID and other databases ID.


Download any of the information in NONCODE.

Related databases

23 Dec 2016
File NONCODE2016_mouse_mm10_current_lncRNA.gtf.gz was added to download center. It is the newest version of mouse lncRNA data.
11 Dec 2015
NONCODE2016 ID is combined with NONCODEv4 ID, Now you can search NONCODEv4 ID in NONCODE2016.
29 Oct 2015
We updated NONCODE to NONCODE2016, The old version(NONCODEv4) has been moved to
28 Sep 2015
Three kinds of search engines were added. Users can use function, disease and conservation search.



The ncFANs server provides two kinds of analysis strategies, function annotion and funtion enrichment of lncRNAs.
CNCI is to classify protein-coding or non-coding transcripts.
lnc-GFP is to predict probable functions for lncRNAs at large scale by integrating gene expression data and protein interaction data.
3dRNA server is to automatically predict the 3D structure of ncRNA from the sequence and 2D structure by using fragment assembly method.